Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLSQVRTCTSAVIAPNQMPSQQCCSELSAITD---------FNCFCSMLLNQGTNLNQDYINNALLIPSKCGEQGRNLRGQRCGNYAIP
1SIY Chain:A ((6-76))
--VQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSCL--KAAAGAVRGINPNNAEALPGKCGVN---------------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11273 for 435 contacts (-25.9/contact) +
2D Compatibility (PS) -6241 + (NN) -3125 + (LL) 780
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -22109.0 ( -50.83 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: