Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------ATAQCRSLTEYSPCLDAVTTGAE---PTDQCCETLAGVMSMDDGLACLCDALTSDAASSLG-----IRTSDAVQLPSKCQAKT-----GLTYTHGYNCKGATVP--------
3FKE Chain:A ((218-340))
DISAKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQASLAEGDSPQCALIQITKRVPIFQDAAPPVIHIRSRGDIPRACQKSLRPVPPSPKIDRGWVCVFQLQDGKTLGLKI
General information:
TITO was launched using:
RESULT:
Template:
3FKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23456 for 584 contacts (-40.2/contact) +
2D Compatibility (PS) -9477 + (NN) -726 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -36209.0 ( -62.00 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_3FKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FKE-query.scw
PDB file :
Tito_Scwrl_3FKE.pdb
: