Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPAD--------RMALKLAPCASAGQDPASAPSSGCCTAVHTIGKQSPKCLCAVMLSNTA-------------RSAGIKPEAAITIPKRCNL--------VDRPVGYKCGAYTLP
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGS--QVP-EAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29494 for 536 contacts (-55.0/contact) +
2D Compatibility (PS) -8573 + (NN) -5115 + (LL) 24
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -47608.0 ( -88.82 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: