Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--WTVNIPT-PQSSCPLANPLSLNVCVDLLGLV-----HVVLGNPSTVECCDIINGLGIDATVCLCTAIHLKVLGLNVDIPLALKLLVTCGRELPNGLTC---------------
1ZHS Chain:A ((1-113))
ASYKVNIPAGPLWSNAEAQQVGPKIAAAHQGNFTGQWTTVVESAMSVVEVELQVENTGIHEFKTDVLAGPL--WSNDEAQKLGPQIAASYGAEFTGQWRTIVEGVMSVIQIKYTF
General information:
TITO was launched using:
RESULT:
Template:
1ZHS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51962 for 506 contacts (-102.7/contact) +
2D Compatibility (PS) -9157 + (NN) 1762 + (LL) 256
1D Compatibility (HY) 1200 + (ID) 1000
Total energy: -58901.0 ( -116.41 by residue)
QMean score : 0.156
(partial model without unconserved sides chains):
PDB file :
Tito_1ZHS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZHS-query.scw
PDB file :
Tito_Scwrl_1ZHS.pdb
: