Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--APSAAECKEETRLAIKA---CKPVVYGMDPSPACCERARVTHVECVCPLITPKLAALIDVNKAVRIIEGCGRKVPRHYKCGSITTP-----
2L0K Chain:A ((1-93))
MHDYIKERTIKIGKYIVETKKTVRVIAKEFGVSKSTVHKDLTERLPEINPDLANEVKEILDYHKSIRHLRGGEATKLKYKKDEILEGEPVQQS
General information:
TITO was launched using:
RESULT:
Template:
2L0K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16359 for 496 contacts (-33.0/contact) +
2D Compatibility (PS) -8386 + (NN) -1497 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -27792.0 ( -56.03 by residue)
QMean score : 0.384
(partial model without unconserved sides chains):
PDB file :
Tito_2L0K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L0K-query.scw
PDB file :
Tito_Scwrl_2L0K.pdb
: