Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------TVPCGTVDMKAAACVGYATGKEPKPSPACCSGLQQLAGT-----------VKTVDDKKNICRCLKNGVKAFAGVQDKFL----------SQIPAVCNIKVGFPVSLNTNCEA----- |
| 2W0C Chain:T ((1-127)) | MANFLTKNFVWILAAGVGVWFYQKADNAAKTATKPIADFLAELQFLVNGSNYVKFPNAGFVLTRDALQDDFIAYDDRIKAWLGTHDRHKDFLAEILDHERRVKPVYRKLIGNIIDASTIRAASGVEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2283 for 378 contacts (6.0/contact) +
2D Compatibility (PS) -8810 + (NN) -693 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -9320.0 ( -24.66 by residue)
QMean score : 0.230
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