Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPMELSTCANAIISSSPPTATCCSKLKE-----------QRSCLCQYVKNPNLQKFINSPNARKVASTCGSPFPNC
1BWO Chain:A ((8-78))
-----SLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLP--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7030 for 361 contacts (-19.5/contact) +
2D Compatibility (PS) -6095 + (NN) -2656 + (LL) 172
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -19159.0 ( -53.07 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: