Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEESELARIKSSKAVVSKTIKEGKQGRKIPIWLMRQAGRSLPEYR--RAVKDTSSFMEICYNTDLVVELTLQPVARFSMDAAIIFSDILIVADVLGCDVDFIRGVGPT----IKPVKNFKELRNPQKIETKTLPILNAIRKVRDKLPEEKSLIGFAGGPWTVASYIIEGRSSKTFSKV---LNLHPSSLEQIIEQITEVTISYLVKQIEFGADVIQLFDSNAGVLSGELFEECVIKPTKKIVSAIKGKFPD-----FPIIGFPKSAGSLYKDYCEKTGVSAVSIDYNVPIEWAKENL--KIPLQGNLNPSLLAYNKMEAIKETKRIIDCFRDLPFIFNLGHGVLPNTPIENIAALVDLVKSQ |
| 1URO Chain:A ((25-360)) | -----------------------GEETDYTPVWCMRQAGRYLPEFRETRAAQD---FFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKD-GHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1URO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217309 for 2756 contacts (-78.8/contact) +
2D Compatibility (PS) -33944 + (NN) -8244 + (LL) 2380
1D Compatibility (HY) -24400 + (ID) 5900
Total energy: -287417.0 ( -104.29 by residue)
QMean score : 0.536
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