Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFCKIIYGNNDNQLSEKSYKSSVCNDDLFNGNEEDFVILENEKMYKTKAEFESEGYKII
4LCV Chain:B ((83-109))
--------YGITDEDMIRKTLRISVCDEDKFRHNEFIGETRVPLKKLKPNHTKTFSICLEK
General information:
TITO was launched using:
RESULT:
Template:
4LCV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6728 for 78 contacts (86.3/contact) +
2D Compatibility (PS) -3005 + (NN) -1959 + (LL) 760
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -26.0 ( -0.33 by residue)
QMean score : 0.278
(partial model without unconserved sides chains):
PDB file :
Tito_4LCV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LCV-query.scw
PDB file :
Tito_Scwrl_4LCV.pdb
: