Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNNNFLLSYACFPNKTRGRYFKEQEDENRSCFQRDRDRIIHSNAFRKLEYKTQVFINYEHDYYRTRLTHSLEVAQIARSIARRLG---------LDE----------DITECIALAHDLGHPPFGHTGENALKRAVQDL-------NLDNEKYE----FDHNVQAIRILTYLEQKHADFDGMNLSWEVVEGVAKHNGPLLGRNAVSYTNNQLLLEYNEKYNLKLEE---FSSIEAQVA----SIADDIAYSVHDL------DDELRANLVTIEDLLNIPLIGKTFKDVESRYSELPQNKLIHESLSRTIGMMISDVVSQTEKNIEDYKIKSVEDVRSLNKMLVTFSPEVANATKEVKKFNMEKIYRSYKLNRTMNKAKRIVEELFQCFYENPRLLPIEWNKLAHKFQRSVVICDYISGMTDRFAIHEHRRIFDTSYEMTSF |
| 3BG2 Chain:A ((23-271)) | ------------------------EQDDTRLGFEVDYDRIIFSAPFRSLQDKTQVIP---TDFVHTRLTHSLEVSVVGRSLGRMVGKKLLEKYPHLEQVYGYKFNDFGAIVAAAALAHDIGNPPFGHSGEKAIGEFFKNGYGKRYKDSLTAKEYQDLIKFEGNANGFKVLS--QSKPGAQGGLRLSYATLGAFMKYPKESL------------------KYGFFQSERALFEDVAQELGLLKR----DVSWSRHPLAYLVEAADDICYTIIDFEDGINLGLIPEYNALQETSDRVSYLRALAIGTLINESVDTFMKYEEEILAGTFDQSLIDKSNYQAQITDIINLSIERIYNSREVIEKEIAGYEILSTLLEARCRALDNNDTHYNQLIQQLLAKSLYENLIQICAEVSTMTDGKALRNYKKIKGL--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -24945 for 1380 contacts (-18.1/contact) +
2D Compatibility (PS) -19861 + (NN) -5921 + (LL) 3408
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -65669.0 ( -47.59 by residue)
QMean score : 0.350
|
|
|