Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDNHFMSIALSLAEKTLGNVAPNPAVGCIIVKDGVVVGEGHTGIGGRPHAEVAALQSAKGSTHGATMYVTLEPCCHYGVTEPCIIEIIRSGIKKVVVAAIDPDKRVSGGGIKALEEAGITVEQGIMQEEAEKLNIGFFTTRKLHRPFIACKIATTLDGKIATFKGDSKWITSGSTRNWVHELRAKYDAIMIGSNTLINDDPLLTCRLPGLESRSPIRLIIDSQEKLKEKHNVVKTADKVT-TWVIINKKI-EKKIKNINYLIVNSNDKPIPASHTGMTSNQGEYSTDKVCLKDMALKLVSEIGITRLLVEGGRVLTTELLKHDLIDRLIICRSGKILGNDAIP-FIGNLEIQSINNCYQFKKAEIIDFDEDIVEVWDKLQ |
| 4G3M Chain:A ((13-364)) | -MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMKEAGIEVREGILADQAERLNEKFLHFMRTGLPYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNV-TKQPVRVILDTVLSIPEDAKVI--CDQIAPTWIFTTARADEEKKKRLSAFGVNIFT----------------LETERIQIPDV-LKILAEEGIMSVYVEGGSAVHGSFVKEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGRDIKLTAKPTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192967 for 2841 contacts (-67.9/contact) +
2D Compatibility (PS) -37996 + (NN) -16468 + (LL) 804
1D Compatibility (HY) -26800 + (ID) 6650
Total energy: -280077.0 ( -98.58 by residue)
QMean score : 0.499
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