Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDSNASCNTGPFYKGVIKFLNQFQSRVNSEQSREDYVKESIIISLEDAISPFYSLVDKGVCYTIPNSERITLLDICVNQLVDNHRKIVHGVILLLSRLRRNRKSMLFNDKYFC
1DIQ Chain:A ((423-480))
-----------------------------------DYVAEFIV-----APRDMHHVID--VLYDRTNPEETKRADACFNELLDEFEKEGYAVYRVNTRFQDRVAQSYGPVKRKL
General information:
TITO was launched using:
RESULT:
Template:
1DIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24828 for 262 contacts (-94.8/contact) +
2D Compatibility (PS) -5732 + (NN) 2474 + (LL) 1980
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -29856.0 ( -113.95 by residue)
QMean score : 0.044
(partial model without unconserved sides chains):
PDB file :
Tito_1DIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DIQ-query.scw
PDB file :
Tito_Scwrl_1DIQ.pdb
: