Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLKVFKSIFLFLVSILFVCPILSLVSILFTESTNSEWVISTLFPEYILNTLILMIGVGSISFIFGVIPAWLTTFFSFPGSRIFEVALFFPISIPGYIISFVYVNSLEFSGPTQSLLREIFHWGKGDYWFPEIKSLGGGILVMGFSLYTYVYILVRSNLKNVSNSVTVASTLGFSSLQSLFSVVIPSIRPSIIAGISLVLMEVITDFGTPQFLAIDTFTTGIYRTWFLLHDKYSAAVLAVAELVFITALIAVEKILQKKEISYSAINTNSDYHNKRSISGAIPLVFAYAMCILPILVGFALPIIPLIYWSIEKGFFIYGARFYNIIANSIGLSFITAMISVSIAIMIGC----TARKNKVINNIARLISLGYAIPNAVIAISIIIF--------------LSKISSFITQYFTEISLVGTVGALIYSYL-FRFFAISFKAIESGLKKTPNEIEWIAYTMGHGPISTCLNIHIPLIKKSILSGFLLVFMDTIKELTATLIIRPFNFETISTRIYELVSDERYREAAPFSLMIVITGLISTIILFKLDDENKK |
| 3PUY Chain:F ((277-426)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRV--LLILPYAVPSF---ISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGL---LKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89387 for 739 contacts (-121.0/contact) +
2D Compatibility (PS) -13067 + (NN) 1087 + (LL) 27404
1D Compatibility (HY) -17600 + (ID) 1750
Total energy: -93313.0 ( -126.27 by residue)
QMean score : 0.221
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