Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKIGFLAVFALVISSQIGSGIFMLPISLAPYSTYSLISWAISGFGAVSLALVFATLCAKFPETGGPHVYVKHAFGPTAAFFVGWTYWVISWVSTTALIVVGVGYLT---PFLHEEIKNIHLFLELLLFTIITLINLRGVATAGRVEFLLTVIKIAVLLAIPVMALFFFNRNNFIISKEMSSLTISQILARSTLLTLWCFVGVELATAPAGSVNNPAKTIPRAVVLGTICVAIIYFINNFAIMGLINGNDLANSRAPYVDAIKIMFSGNWHLIISIVAFVFCVGSLNAWVLSSGQVAFGLAKDRLMPQLFAKRNEHGSPFWGITTSSSGTAILLILTSNNNFAQQITSIIDFSVVSFLFVYLACSLAFLKVVIKERNYHK-----LLTGSIATTFCCWVILETSINTLLIASLFTTSGIPLYLFWYRRASAQ |
| 3LRC Chain:A ((7-411)) | -AHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPL--VLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPN--------------------TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALL--LLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -399363 for 3450 contacts (-115.8/contact) +
2D Compatibility (PS) -37854 + (NN) -4497 + (LL) 1572
1D Compatibility (HY) -34800 + (ID) 5550
Total energy: -480492.0 ( -139.27 by residue)
QMean score : 0.339
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