Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKSNIIMKVAKRHPLLDRIVIAAIVNRFFEILSSTLEHHNRVEIRGFGSFSIR------SYNLKETSHLMLQKFAKNQYFKTYFRSSKKLSDLINE
1OUZ Chain:B ((2-91))
--TKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIAIRGFGSFSLHYRAPRTGRNPKTGDKVELE----GKYV-PHFKPGKELRDRANI
General information:
TITO was launched using:
RESULT:
Template:
1OUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26478 for 409 contacts (-64.7/contact) +
2D Compatibility (PS) -8936 + (NN) -575 + (LL) 820
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -40169.0 ( -98.21 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_1OUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OUZ-query.scw
PDB file :
Tito_Scwrl_1OUZ.pdb
: