Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIEGQDFGVGLLFYNSGNPLTGVLKFINF-YDENNLVLQKDQRRNRQALLDRGRLFSNYLHIKQGWCLCHNVW
3ZYR Chain:A ((8-48))
-----------------STDSLS--FSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSA
General information:
TITO was launched using:
RESULT:
Template:
3ZYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 512 for 150 contacts (3.4/contact) +
2D Compatibility (PS) -4232 + (NN) 352 + (LL) 868
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -6150.0 ( -41.00 by residue)
QMean score : 0.055
(partial model without unconserved sides chains):
PDB file :
Tito_3ZYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZYR-query.scw
PDB file :
Tito_Scwrl_3ZYR.pdb
: