Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDAVKVIAEELKGYIERIEKLEQEKKNVQDQIHDVYAKAADKGWNIKVMKQIIRLRKMEDGDRAEQEILLNTYKRALGMSCEEN
3NV5 Chain:A ((144-178))
---------------------------------HTPYRKALDKGLNLA------KIRKVEDKVREVASSLIDSF-----------
General information:
TITO was launched using:
RESULT:
Template:
3NV5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4664 for 137 contacts (34.0/contact) +
2D Compatibility (PS) -3968 + (NN) -2347 + (LL) 4828
1D Compatibility (HY) -2400 + (ID) 700
Total energy: 77.0 ( 0.56 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_3NV5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NV5-query.scw
PDB file :
Tito_Scwrl_3NV5.pdb
: