Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIIIDGKKIASGLCEKLSQRIDVLKREHSIFPCLKVIFVGNNPASQVYVRNKQKKAESIGISSETIVLPDNILENELIEKINELNNDRFVNGILVQLPLPNHINASKVINTVSVEKDVDAFHRENVGKLVKGEKNCLVPCTPKGALHLIKLVETNLSGKNAVVIGRSNIVGKPMFHLLLQENCTVTILHSQSKDLAEYCSKADVVVTAVGKPNFVQEGWIKEGAIVIDVGINSVSIEGKTKLIGDVDFDRVKEKTKAITPVPGGVGPMTIAFLMINTVIAACLQKKVDASDFVS
1B0A Chain:A ((5-281))
---IIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPR-LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENT-LQACVEYHDPQDE---
General information:
TITO was launched using:
RESULT:
Template:
1B0A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187928 for 2343 contacts (-80.2/contact) +
2D Compatibility (PS) -30131 + (NN) -12549 + (LL) 1168
1D Compatibility (HY) -24400 + (ID) 6550
Total energy: -260390.0 ( -111.14 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_1B0A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0A-query.scw
PDB file :
Tito_Scwrl_1B0A.pdb
: