Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRGIGTDIVYIPRILRILQKYGKKFLNKIYTEQEIEISRKYNSQEMQAKYLAKRFAAKEAFVKALGGFSHGIIMKDIEIYNDVRGKPHLTVSKNFIFKDHMIHLSLSDDGDCATAFVIICSSLP
4JM7 Chain:A ((25-141))
MIHGIGVDLIEIDRIQALYSKQ-PKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALG-----VAFNDIDCYND--GKPKID------YEGFIVHVSISHTEHYAMSQVVLEKS--
General information:
TITO was launched using:
RESULT:
Template:
4JM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87712 for 777 contacts (-112.9/contact) +
2D Compatibility (PS) -12098 + (NN) -5336 + (LL) 444
1D Compatibility (HY) -9600 + (ID) 2050
Total energy: -116352.0 ( -149.75 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4JM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JM7-query.scw
PDB file :
Tito_Scwrl_4JM7.pdb
: