Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIAENRKARFEYFILEEFEAGMVLLSSEVKSLRERKVNISDAYVTEKNGEIWLHNMHIAEYKAANKKKHKPKRERKLLLHKKEINKLISQIKTAGVTIVPLSIYFNDKGLVKTRIAIVKGKKLYDKRATIKQREWNRAKSRLSKNNL
3IYQ Chain:B ((4-123))
---VLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLHKHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGK--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IYQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53404 for 864 contacts (-61.8/contact) +
2D Compatibility (PS) -12074 + (NN) 4908 + (LL) 2396
1D Compatibility (HY) -11200 + (ID) 2600
Total energy: -71974.0 ( -83.30 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_3IYQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IYQ-query.scw
PDB file :
Tito_Scwrl_3IYQ.pdb
: