Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMVKGILCDWLGVTELQESQKIDAEQFQRIFSALKKWQEAQKVNTEQFEKVFSALEEKIGTEQF--QSMQEYLNGLQKKFTGLEEKAGTLIETVGEQEKIMLTCCIIASVITLAAISFITFCIYQGVKSGRERQRSLSDISAQNLMNQTHQAQNFM |
4XDZ Chain:A ((280-325)) | ---------------------------------------------------------ERIRSGEFAREWIKEYERGMPTVFKELSELEGSTIETVGRKLREMMFRGM-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10359 for 180 contacts (57.5/contact) +
2D Compatibility (PS) -4844 + (NN) -1312 + (LL) 10072
1D Compatibility (HY) -3200 + (ID) 800
Total energy: 10275.0 ( 57.08 by residue)
QMean score : 0.256
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