Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAYNTAPKDLRLIVFLGHLTINNFIILYSIVSIIRNFMSIDKKLKILPNKVLI-IVTLVPKDTEKMLQDDKNSKFIMLIY
1WUD Chain:A ((556-580))
---------------------------------------------VVFNDATLIEMAEQMPITASEMLSV-----------
General information:
TITO was launched using:
RESULT:
Template:
1WUD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2738 for 68 contacts (-40.3/contact) +
2D Compatibility (PS) -1927 + (NN) 681 + (LL) 4564
1D Compatibility (HY) -800 + (ID) 100
Total energy: -320.0 ( -4.71 by residue)
QMean score : 0.201
(partial model without unconserved sides chains):
PDB file :
Tito_1WUD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WUD-query.scw
PDB file :
Tito_Scwrl_1WUD.pdb
: