Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHLIVGLGNPGSQYELTYHNIGFIIVDAICKHWNFQ-SFSKKADCLITSSVINDNKIMLMKPYSFMNNSGIPVARIRNFYKFSLDNVIVIHDDADLEPGRIKIKKGGGSAGHNGLKSIDSSIGN-DYWRLRFGIGRSDSQRSLADYVLSKFSNLD--DVIPLVERIAQNIHLMLQGNNIAFTNSIV
2Z2I Chain:A ((6-178))
--LVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQ----------
General information:
TITO was launched using:
RESULT:
Template:
2Z2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129946 for 1384 contacts (-93.9/contact) +
2D Compatibility (PS) -17887 + (NN) -868 + (LL) 548
1D Compatibility (HY) -10400 + (ID) 3200
Total energy: -161753.0 ( -116.87 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_2Z2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z2I-query.scw
PDB file :
Tito_Scwrl_2Z2I.pdb
: