Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLALPALFLWLLNWTLVKEIWRFNDLMQEAPEEERQLIIYRLVDTLP-FITQTTYDLSAVASVNLSVNKLI--EKYGENLSKDG----FYTQLNRENTTNIEGYIKQSNEFKAEEKSHALKCLGFINRIEDKFQDNCSKLTLKQADILY
4NNO Chain:A ((205-291))
--------------------IWEINTEKQGTPEQMRQAIEFVKKHKLKHLLVETSVDKKAMESLSEETKKDIFGEVYTDSIGKEGTKGDSYYKMMKSNIETVHGSMK-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4NNO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7206 for 435 contacts (-16.6/contact) +
2D Compatibility (PS) -8132 + (NN) -982 + (LL) 5652
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -14268.0 ( -32.80 by residue)
QMean score : 0.191
(partial model without unconserved sides chains):
PDB file :
Tito_4NNO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NNO-query.scw
PDB file :
Tito_Scwrl_4NNO.pdb
: