Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDTPFKATSMEDLNDTISKIINYRFKNDAILEEALTHPSLNKRNSKNQIENYERLEFLGDSILNMIVSAILFRLFPKEKEGALARRKTDLVCGNTIANVAKEIKLGNFIIMNNSERCNGGKRNLKNLENALEALIGAIYIDGGF-AN-VKKFVTKHWEERAKGMLS---LPQDPKTSLQEWTQKNKLPLPEYELMKQTGPAHSPEFTISICIENYGKVFACASSKKVAEQKAAELMLEKINNSEKTI
2NUE Chain:A ((5-221))
---------------EQLEKKLGYTFKDKSLLEKALTHVSYSKK------EHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFI------RIKRGKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLEESE---
General information:
TITO was launched using:
RESULT:
Template:
2NUE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88461 for 1534 contacts (-57.7/contact) +
2D Compatibility (PS) -23266 + (NN) -12298 + (LL) 1244
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -143131.0 ( -93.31 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_2NUE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NUE-query.scw
PDB file :
Tito_Scwrl_2NUE.pdb
: