Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHIPVLLKEMLLQLSPQNGGIYVDATFGAGGYSKAILESAD-CKVYAIDRDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNSSHTNASTFVNALREEEIANTIYNYGGE-RHSRRIARAIVNARKKKTIKTTFELANIVRSV-----VFRGKSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS |
1N2X Chain:A ((10-296)) | --HIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT--------------------LGIEK-----------------VDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKRHF--ATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFR--------NSKKLRILTEKPVRPSEEEIRENPRARSGRLRAAERI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143581 for 2439 contacts (-58.9/contact) +
2D Compatibility (PS) -29796 + (NN) -8884 + (LL) 2720
1D Compatibility (HY) -26800 + (ID) 6300
Total energy: -212641.0 ( -87.18 by residue)
QMean score : 0.551
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