Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYSAVIVKPKRNVFAVLDIGTTKIICLIVKVSGNFNYKITGTGYKIAEGINGGLITDIKYASYSISSTIGLAEQVSEETIDQIYVNIAGCGILSFNVHNEIIAANHEISDRDIKRVIFQTFEKYIEENVIIHNIPLRYHLDDMTDIREVSGLYGKRLSADVNVVTASRPALTNIENCITNNSGISMAGCIASAYSAGFACLSEDEKELGTAIVDIGGGCTAIGIFKRSKLIYANSIPIGGVHITRDIAYGLCTSIEHAERIKILYGSTVVTSIDENEYITVQSNENDEQARIPKSELVDIIRPRIEEILELVKEQFRKQKDPINK------VVITGGTSRLASMKEIASYIFNKQVRIGCPESYGGLD-------GEYNKNPVFSAAIGSIKLIVDTFYKNNPDMLGQDGKISKLYHWVKSKVTV |
1E4F Chain:T ((189-390)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDVSAVLDTSFEESERLIITHGNAVYNDLKEEE-IQYRGLDGNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAK---IGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGC---YANSDRPSIINADEVANDPSFAAAFGNVFA-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E4F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109499 for 1513 contacts (-72.4/contact) +
2D Compatibility (PS) -19648 + (NN) -5130 + (LL) 15448
1D Compatibility (HY) -10400 + (ID) 2800
Total energy: -132029.0 ( -87.26 by residue)
QMean score : 0.475
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