Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDEDLELLKFYYEVGIDCTLTEGNEEKKVEKEKNSKAIQSPTIQAEVQKKEQQSMFPSDWIIEARKLASKCNSMDELRSAVKSFEGCEIKKTSTNTVFSDGNQSAKIMLVGEAPGANEDLKGIPFCGASGMLLDKMLSAI-NLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVEKHIALISPHILILVGGISCYSLL----DNTKTISTLRGRFHTYTNQYLSYSITTAVIFHPAYLLRQPAQKRLAWEDLKKIREYLNSTNNCTGV
4ZBZ Chain:A ((2-187))
------------------------------------------------------------------------DSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDKEGRPFVGAAGKLLTQMIKEILGLERDQVFITNVVKCRPPNNRDPEEDEITACSPYLDRQIDIIMPKIIVTLGRHSTKYIFSKMGENFSSITKVRGK--SYVWKYKEKEIIVFPTYHPAAALYNPNLRKILEEDFKKIRELAITP------
General information:
TITO was launched using:
RESULT:
Template:
4ZBZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107994 for 1480 contacts (-73.0/contact) +
2D Compatibility (PS) -19912 + (NN) -12657 + (LL) 6004
1D Compatibility (HY) -11600 + (ID) 3500
Total energy: -149659.0 ( -101.12 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_4ZBZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZBZ-query.scw
PDB file :
Tito_Scwrl_4ZBZ.pdb
: