Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKSIFTFSFFTAVSRISGLIRDILIAMVVGATSLADVFFSSFRFASLFRAFFAERAFATSFVPLYSAESRDSKRAFNFASSVISITFIIVLNFCLIMQTFFSYMVQIFTPGFDQSKLALAVTLSRIMMPYIIFASIASLIGGMLQVKQHFASTAIAPIILNLCLIASLLVPYIKTPAHNLSIAVLIGGMLQLLLMLFGAYKLKAFFFFSMKLSNEVKLFFKRVIPAIINSCVIQISLWIDTIMASFIPNAVSYIYYADRLNQLPQGVVGTAIGTVLLPLISKQANDTENTVKIQNRALNIGLMLIMPTTAAFIIIPNTILLTLFSYGKFDHYAVQQTAPTLIALSLSLPAFIINKVLLPTFFAKSNLKIPTIFSLACLGINVVLNLLLMNKYQHTGIAIATSISTWINSILLINYLTINKMYKANQVLLLNIAKILVATAVMSVALYVSSSLSAGLFFDRIFARVIYLAALVVLSAVIYFGTLYLMFMGDFKCTKL |
| 3W5A Chain:C ((16-26)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LITVILIWLLVRSYQY------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3926 for 35 contacts (-112.2/contact) +
2D Compatibility (PS) -1066 + (NN) -126 + (LL) 45436
1D Compatibility (HY) -3200 + (ID) 250
Total energy: 36868.0 ( 1053.37 by residue)
QMean score : 0.056
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