Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSRSFFPEGASLEGKVKTIAELNQKLESRKSHSAEKVHQGFERIVELDHQCKGKGIFRSGKVA
4U0Z Chain:A ((4-35))
-----------------EARAALNQALEMKRQGKREKAQKLFMHALKMDPDFVDALTEFGIFSE
General information:
TITO was launched using:
RESULT:
Template:
4U0Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9892 for 179 contacts (55.3/contact) +
2D Compatibility (PS) -3471 + (NN) -2019 + (LL) 920
1D Compatibility (HY) -800 + (ID) 500
Total energy: 4022.0 ( 22.47 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_4U0Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U0Z-query.scw
PDB file :
Tito_Scwrl_4U0Z.pdb
: