Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLPVVHLLPNNDLAQFNYRHVKIDGILSDIELYVFAGQSGYHALSPMLLTTGRYMLVNKGIVREKEEKKAKIAKVVADGVLYCDSSKSKSWLIKNDIALNTWFTLSTEEISNELGIELEKCILWQKGFSGKLAIQPMKHLEYAITWFALSLIWLIMCIAYYRQNKCHLSS |
1N6L Chain:A ((41-98)) | --------------AAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N6L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9283 for 261 contacts (-35.6/contact) +
2D Compatibility (PS) -6011 + (NN) 221 + (LL) 2832
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -15541.0 ( -59.54 by residue)
QMean score : -0.059
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