Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRQSGASETKGFYLSGRYYSRFFASMGKLKLRSEDVNYRIATDFWNDGRDTPEELYHLDKHS
3A0Y Chain:A ((670-698))
---------------------------GKIKITSEDMYTKVRVSVWNSGPPIPEEL-------
General information:
TITO was launched using:
RESULT:
Template:
3A0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3734 for 98 contacts (38.1/contact) +
2D Compatibility (PS) -2788 + (NN) 52 + (LL) 1824
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -228.0 ( -2.33 by residue)
QMean score : 0.177
(partial model without unconserved sides chains):
PDB file :
Tito_3A0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A0Y-query.scw
PDB file :
Tito_Scwrl_3A0Y.pdb
: