Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQGIVLDEPSVVARIKEKGSYIPYAFGKKAKMMLGKTPGEIEAIRPLKDGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESAGANEVFLIEEPMAAAIGAGLPVTEPEGSMVVDIGGGTTEVAIISLGGIVYSRSARVGGDIMDEAIRSYIRENHKLLIGETTAEKIKKSLGSASLPDENNKEWMMVKGRDLVSGMPKEMLLSEYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTKLPVHVADDPLCCVALGSGKVLENMDYFSHVLFKQD
1JCG Chain:A ((1-332))-------------------MLRKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTGEILK--VGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKKLQGA--


General information:
TITO was launched using:
RESULT:

Template: 1JCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -176943 for 2972 contacts (-59.5/contact) +
2D Compatibility (PS) -36432 + (NN) -15345 + (LL) 1688
1D Compatibility (HY) -31600 + (ID) 8350
Total energy: -266982.0 ( -89.83 by residue)
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_1JCG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JCG-query.scw
PDB file : Tito_Scwrl_1JCG.pdb: