Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSPISIKETNADQLPNEKGTRYKENKEYFYTSLKNEAIGVVITGLFITAAVMVPSVVGAVIYGIIAVLVVITTILHAIISTLSSYREMEENKVEHVNSQAIKI
2NNJ Chain:A ((82-119))-SPISQRITKGLGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRF


General information:
TITO was launched using:
RESULT:

Template: 2NNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8459 for 176 contacts (48.1/contact) +
2D Compatibility (PS) -3879 + (NN) -593 + (LL) 208
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 1545.0 ( 8.78 by residue)
QMean score : 0.251

(partial model without unconserved sides chains):
PDB file : Tito_2NNJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NNJ-query.scw
PDB file : Tito_Scwrl_2NNJ.pdb: