Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGTGNGPEIDIAVDPLEGTTICAHYKQSAMSVLAAAKKGDFLHAPDIYMEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILKIRKLGARVKLIDDGDIAA--IVSLINGSHDIYIGIGGAPEGVLAAAALSSIGGQMEGRLIF-----DTHQSKE-------RAKILNIDDLEKIYSIKDMVKGESV-FIATGVTSGELVDGVKFGYNICSTSSLIMLHNKVIKLQTIQNLC |
| 3BIG Chain:A ((7-323)) | ---LAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIMLNQVNIDGTIVIGEGEIAEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALAVLAVGDKGCFLNAPDMYMEKLIVGPGAK-GTIDLNLPLADNLRNVAAALGKPLSELTVTILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMNGRLLARHDVK-NEENRRIGEQELARCKAMGI-EAGKVLRLGDMARSDNVIFSATGITKGDLLEGISRKGNIATTETL-LIRGKS-TIRRIQSIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178206 for 2651 contacts (-67.2/contact) +
2D Compatibility (PS) -32697 + (NN) -14536 + (LL) 692
1D Compatibility (HY) -26000 + (ID) 6800
Total energy: -257547.0 ( -97.15 by residue)
QMean score : 0.572
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