Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSQKGVDLAKSKKDISKFETASSNQKKEW--ETD---SKKKAEEIERLKTLKKKSDEELQEARGKLAEQERLLKYPEAEKSKRCCSIIYCSTYRGTS
3NMU Chain:A ((203-269))
-------ELGLSEEKIKKILEAKEKTMGAWMDQTDIEVVRQLAEEIDRLYQLRKKLEDYIDRAMDDVAPNLKALVGAKLAARLISLAGGLRELAMMPS
General information:
TITO was launched using:
RESULT:
Template:
3NMU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14876 for 231 contacts (64.4/contact) +
2D Compatibility (PS) -6568 + (NN) -2368 + (LL) 356
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: 1696.0 ( 7.34 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_3NMU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NMU-query.scw
PDB file :
Tito_Scwrl_3NMU.pdb
: