Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIKIAPSILSANFAKLGEEVKRINNLGVDYIHIDVMDGNFVPNITIGPGVISTIRKY-TNLFFDVHLMIKSPGDHVESFINAGADIITIHAEAEVHLERLIRKIKSYKNVNDAKKKVQVGVSIVPSTSPGIFEYIIHELDIVLIMTVNPGFGGQEFIYSQLGKISVVKKMIRERGLKTQISVDGGVSLSNAADIIKAGADILVAGSAIFRAKNMKKAVNDFKNLSL
3INP Chain:A ((28-241))
--IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFG--------IQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGF--QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELN
General information:
TITO was launched using:
RESULT:
Template:
3INP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -199132 for 1784 contacts (-111.6/contact) +
2D Compatibility (PS) -22700 + (NN) -7789 + (LL) -16
1D Compatibility (HY) -17600 + (ID) 4450
Total energy: -251687.0 ( -141.08 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3INP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3INP-query.scw
PDB file :
Tito_Scwrl_3INP.pdb
: