Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSFFFKRTFGSINKKIIKSFRKIVEQINALETKMQSLSDEELADKTEEFKRELKNGKTLNDLLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMVSEMKTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEWMSKLYNSLGVSVAFITNDLTDEERKEAYSADIVYSTNNELAFDYLRDNMKFSREDMVQRGFNYAIVDEVDSILIDEARTPLIISGPVEENNQIYKHIDKIVTKLV-----DSD-------YEVDEKGRAVFLTEDGISQVEELLRSYNLISEKSSLYDAGNMIMTHYIDQALRAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLHQALEAKENLEIQYENQTLASVTFQNYFRMYNKLSGMTGTAATEAEELRDIYRLNVVKIPTNVTVKRIDVDDEIYGTEKEKFNAVLKFIKECHKRLQPVLVGTVSIENSEKLSALLRNHFLRHSVLNARYHEQEAYIIAQAGVPGNITIATNMAGRGTDIQLGGNAEMIAKVELKKIKNADEREKKYQEIIERVKRDKEI----AMKAGGLCVIGTERHESRRIDDQLRGRSGRQGDPGLSKFFLSLEDDLMRIFGSDRMRSFLKRVGLKNNEAIHHPWINKALEKAQKKVEARNYDVRKSLLKFDDVINNQRKVIFEQRNHILGNEINDLFEVYSEVNKSVMESIVQGGYYEDYVEDI----AKEFHIRYGITLDKKDLAKFLNKQEAL------DYINGKVKEFFTEKEKYFNGQQTTDLWNTIVKQVMIMTLDHLWREHLSILESLRQSIGLRAMGQKDPLNEFKREAFLIFECMLERGKELTIHRLAHFKLVDNQEVGGRLHPTRKDNLPKVSRNDKCPCNSGKKYKHCHGAVTVMN
2VDA Chain:A ((10-831))--------FGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQ----AEVAALENPT------AEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELL--DVSDVSETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLP-IAEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAE----MMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEE-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VDA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -244493 for 6263 contacts (-39.0/contact) +
2D Compatibility (PS) -86210 + (NN) -36201 + (LL) 2472
1D Compatibility (HY) -76000 + (ID) 21100
Total energy: -461532.0 ( -73.69 by residue)
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_2VDA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VDA-query.scw
PDB file : Tito_Scwrl_2VDA.pdb: