Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLINPKVSAMFFDQIVTATDHNIAWEKIQNLLYNLYGEATYNSWLSSLKFVSSSNGEVLLSVPTRFIKEWITVHYMEKILLLWQNEDKSICSIDIQVTEEKNSSSSIISKNKEESVNNLGSPLDPRFTFDNFVVGKPNELAFTAAKRVAESIDPIPGSNPLFLYGGVGLGKTHLMHAIAWHIVNSPSAKR--KVVYLSAEKFMYQYITALRSKDIMLFKEQFRSVDVLMVDDVQFISGKDSTQEEFFHTFNALIDQNKQLVISADRSPSDLDGVEERIKSRLGWGLVADINETTFELRLGILQAKVEQMNMYVPQDVLEFLARNIRSNIRELEGALNKVAHTSLIGRSMTVESASETLMDLLRSNHRSITIAEIQKKIAEFFNIKVTDMHSNRRLRSLVRPRQIAMYFAKKFTHKSLPDIGRSFGGRDHATVIHAVKQIENFIKTDSEFADEINQLRKMFK |
| 2HCB Chain:A ((3-316)) | ---------------------------------------------------------------------------------------------------------------------------LNPKYTLENFIVGEGNRLAYEVVKEALENLGSL--YNPIFIYGSVGTGKTHLLQA-----AGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK-NVREIEGKIKLIKLKGFEGLERKERKERDKLM-------------QIVEFVANYYAVKVEDILSDKR--RTSEARKIAMYLCRKVCSASLIEIARAFK--DHTTVIHAIRSVEEEKK--RKFKHLVGFLEKQAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157355 for 2284 contacts (-68.9/contact) +
2D Compatibility (PS) -33428 + (NN) -14309 + (LL) 10344
1D Compatibility (HY) -28000 + (ID) 5800
Total energy: -228548.0 ( -100.06 by residue)
QMean score : 0.529
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