Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNMYRVLLVLALLTSSNLNALINYSKPISVDSRIKTFVYSPNEVFTVIFSQGYYSYIEFAEGEKVKNIAVGDASSWRISPYDNKLLIMPFEVSSRTNMIITTTKKRNYIFDLISRPNYDKYPDTDAEKVSHDYSAEKDISYVVRFYYPKEED-EFDIDLDEISAPTQMQYVVDRPEKIIQENDTKYNYTYIDEGGNADMIPIELFDDGYLTYFKFRDSNKIPQIFAKDGKTRLPCKRLLFDGYVIIKGVHKKLFMRYENDEVEIINRSL |
4P2R Chain:B ((7-57)) | -----------------------------------------------------------------------------------------------------------------SRPWFLEYCKSEC----HFYNGTQRVRLLVRYFYNLEENLRFDSDVGEFRAVTELGRPDAENWNSQPEFLEQKRAEVDTVCRHNYEIFDNFLVPRRVEPTVTVYPLLVCSVSDFYPGNIEVRWFRNGKEEKTGIVSTGLVRNGDWTFQTLVMLETV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2982 for 229 contacts (13.0/contact) +
2D Compatibility (PS) -4995 + (NN) 260 + (LL) 8992
1D Compatibility (HY) -5200 + (ID) 850
Total energy: 1189.0 ( 5.19 by residue)
QMean score : 0.172
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