Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSISLSVLDDSVLIKPINEEKQ--GGIVLPSSAEKKPTKGEVIAIGEGSRNSSGE-RIALTVKAGDKVFYRQWAGTEIEHGSEKLIVMKESDILAIIK
1P3H Chain:A ((1-97))
-AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVS
General information:
TITO was launched using:
RESULT:
Template:
1P3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20033 for 594 contacts (-33.7/contact) +
2D Compatibility (PS) -10036 + (NN) 1640 + (LL) 208
1D Compatibility (HY) -10400 + (ID) 1650
Total energy: -40271.0 ( -67.80 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1P3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P3H-query.scw
PDB file :
Tito_Scwrl_1P3H.pdb
: