Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVRRITLNSNFMFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYNDKFRLVDLPGYGCSHASKDETIQYLGLVEYYLIHRRNLRRVFVLIDSKVRLKEIDKDFIYWLTYNNINFDVVLTKIDKVDRENLDAIIESTRKWINNESVSIRQISVRVKYEMTKVRDEFFKFTR
1SUL Chain:A ((6-164))
--------SEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLA---------QTLNFY-IINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMI
General information:
TITO was launched using:
RESULT:
Template:
1SUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95336 for 1067 contacts (-89.3/contact) +
2D Compatibility (PS) -15910 + (NN) -5769 + (LL) 1020
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -129995.0 ( -121.83 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_1SUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SUL-query.scw
PDB file :
Tito_Scwrl_1SUL.pdb
: