Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNEIRERFIKFFVRNNHKQVFSSPLIPEHDPTLMFTNAGMVQFKNIFTGIQKTDIKRAVSSQKCLRVGGKHNDLENVGYTTRHHTFFEMLGNFSFGDYFKETAIEFAWKFITEE--LSLDKNRLSITIYHTDDKSYEIWRKVSGFSNDKIIRIA-------TDDNFWSMGNIGPCGPCSEIFYDY---------AKPNLQNDDRIVEIWNLVFMEFNKDEEGNLQKLPKKCIDTGMGLERVAAVMQNVYDNYDIDLFSALISKSQEYCG--NVENKAAHKIIADHLRAAAFLIAEGVLPGNEGRNYILRRLIRRAVRYIHQLGYNDPLLHRIFPVLIDSTSSAYMGGVYPELIRAKSLIETTLKSEEENFKDTLIKGINLLKKFTTDLKPGDTLSGESAFKLYDTYGFPLDITLDILKERKINFDQKGFDNAMEEQKERARAKWTGSGEKSIEQIWFNLIDKFGKTEFVGYEFSEVKDAKVLVILSSKNEVIDSAKEGEKITIILDKTPFYGESGGQVGDTGSFIIPSITPVLDTKIQKKNDRSCDRITEGIAIVENTNKVNDLYLHRCIVKSGSICKDDIVTASTDKERRQNLRRNHSATHLLHFALRKILGDHVTQKGSLIAPDRLRFDFSHNTQVTRDQLSLIEDMVNSLIRENLSAFTKIQSMNQAIGEGAMALFGKKYGDQVRVVNIGDSKELCGGTHVERTGEIGLFKIITECSIASGVRRIEALTGQEAIDYARDNEINLRKIAELVKAPVNEITSRLSILNQERKESETKIKSLYKKLVSAENIKSIEINGMNFVSHSFTDIPANIVREFTLQQQKPKTVIAFTAMEKNKTVLIVKVSKDLVDKISTKELVSTVTGGVCGENAELTQTGCDSSDIFTAIYSYLTR |
3HXX Chain:A ((6-436)) | ----EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKLDAILFAWLLLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPE-EDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSL-RVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLID-----VMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246693 for 3536 contacts (-69.8/contact) +
2D Compatibility (PS) -44487 + (NN) -15271 + (LL) 31204
1D Compatibility (HY) -42400 + (ID) 11500
Total energy: -329147.0 ( -93.08 by residue)
QMean score : 0.546
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