Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQSIIKELQDFWIGEGCTILHPYTSEVGAGTL--HPATIMSAIDVKPTKIAYLQPVVRPAD-------GRYGDNPNRLYQHHQYQVIIKP---SGNNLQDVYLSSLRALGISTEKYDIKFIEDDWENPSVGASGLGWEVTCNGMEVTQLTYIQ---QIGSINCRIIPGEV-----AYGLERLAMCIQGVNNVYDIIWNDNGITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK |
| 2ZZF Chain:A ((97-270)) | ----------------------------VGASIMDFQPWVISGEADPPANPLVISQPSIRFTDIDNVGITGRHF-TIFEMMAHHAFNYPGKPIYWMDETVELAFEFFTKELKMKPE--DITFKENPWAGG--GNAGPAFEVLYRGLEVATLVFMQYKK-------KYIPMETKVVDTGYGLERLVWMSQGTPTAYDAVLGYVVEPLKKMAGIEKIDEKILMENSRLAGMFDIEDLGDLRYLREQVAKRVGITVEELEKAIRPYELIYAIADHTKALTFMLADGVVPSNVKAGYLARLLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45942 for 875 contacts (-52.5/contact) +
2D Compatibility (PS) -14462 + (NN) -3317 + (LL) 2604
1D Compatibility (HY) -6400 + (ID) 2250
Total energy: -69767.0 ( -79.73 by residue)
QMean score : 0.277
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