Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIHVAIYMLLLCMSAMLYRIAKLSDIYNKALAFNHFSTQVILLITAVSIILDSFFLVDIALLYASVSFISTIALMRLMLL
1KF6 Chain:C ((35-61))
-----AVWFSIELIFGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPII
General information:
TITO was launched using:
RESULT:
Template:
1KF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6600 for 119 contacts (-55.5/contact) +
2D Compatibility (PS) -2817 + (NN) -2596 + (LL) 792
1D Compatibility (HY) -1600 + (ID) 50
Total energy: -12871.0 ( -108.16 by residue)
QMean score : 0.058
(partial model without unconserved sides chains):
PDB file :
Tito_1KF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KF6-query.scw
PDB file :
Tito_Scwrl_1KF6.pdb
: