Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIIYDYERGIENNVALTFGNFDGIHLGHELAISTLKKIAQERGFPSAILTFEPHP-STILFNRNNFRLINQEQKKELISSYGIDYLYIINFNKGFSQISCDDFISKILIDRYNTKHIIVGESCTFGHKRLGNTLILRKHSETYGYSLTKLEPLTVNGKICSSSSIREHIQKGEIEIANKLLGRSYQVSGTVMKGALR-GREIGFPTINIPIEDCMIKPKFGTYYAKVAFTSLDVIPARDAGIYRSQYQSNETTEGSAKGSFSGSGPSWLY-GVVNIGMRPTFNDLKKPIVEMHIFDFNEDIYDRKVNIQLLKFIRSEKRFLSVDELTKQINHDILEAYQLRTDL |
3ZUG Chain:A ((15-311)) | ------------DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQSR-LTVDVIDLLDDEGVRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALPADGVYAGW-----LTILP----------------TEAPVSGNME---PEVAYAAAISVGTNP---DEQRS-VDSFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLAQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174486 for 2309 contacts (-75.6/contact) +
2D Compatibility (PS) -31865 + (NN) -8799 + (LL) 2272
1D Compatibility (HY) -14800 + (ID) 4600
Total energy: -232278.0 ( -100.60 by residue)
QMean score : 0.492
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