Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKYIVFVLSYILGSIPFSLVITKIKGINLREVGSGNIGATNVARTGSKCIAALALLLDSLKGFIAVYIAKQFFDDGSFHMYASAILVVLGHM---------FPVWLKFSGGKGVATTLGILIALNISLVLAFVFVWLAVFFAFRYSSLASLTSTIAAVLSSFFFQRDLFFTLLTVAILIFFKHYRNIVNLLQGRERKFS |
3MKB Chain:B ((89-123)) | --------------------------------------------------------------------------DPGSFHLLTDSFIVELAHLKKVAFTPFVFAVWIKFFQVVIDAISSQYH------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12637 for 103 contacts (-122.7/contact) +
2D Compatibility (PS) -2751 + (NN) -2699 + (LL) 14056
1D Compatibility (HY) -4800 + (ID) 650
Total energy: -9481.0 ( -92.05 by residue)
QMean score : 0.048
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