Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVKKNRINEFITAKEVRLVDHNGEMVGVVSIGRALTFAQNVGLDLVEVAPDSIPPVCKILDYSKQKYDAKKKASEAKKKQKTLTIKEIKLGPNIGDHDYETKLRHARDFLTHGHKIKVTMKFKGRELINTEVGLEKLERLIRDTEDIAKIESAPKREGNQYFLALTTK
2CRQ Chain:A ((4-85))
-------------------------------------------------------------------------GSSGPKTGPTMT-KELVFSSNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATFSSRPKAIRGGTASMCVFR
General information:
TITO was launched using:
RESULT:
Template:
2CRQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2571 for 445 contacts (-5.8/contact) +
2D Compatibility (PS) -8743 + (NN) -3104 + (LL) 5572
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -13646.0 ( -30.67 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_2CRQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CRQ-query.scw
PDB file :
Tito_Scwrl_2CRQ.pdb
: