Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQLLTKFFNLSSSKVELGIEVDHATVPWKGWLNGGQINLLLDMVDHQLGVLLGLEVGSY
3KTP Chain:B ((12-20))
------------------------PGVPWKGLQ---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KTP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -202 for 17 contacts (-11.9/contact) +
2D Compatibility (PS) -878 + (NN) -140 + (LL) 3608
1D Compatibility (HY) -800 + (ID) 250
Total energy: 1338.0 ( 78.71 by residue)
QMean score : -0.017
(partial model without unconserved sides chains):
PDB file :
Tito_3KTP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KTP-query.scw
PDB file :
Tito_Scwrl_3KTP.pdb
: