Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENKLREIVLDTETTGLDIESGHRIIEIGCVELINRIPTGKV---FHKYLNPERDIPYHSFKIHGISEEFLEDKPLFSDVVFEFLDFISGDILIIHNAEFDIKFLNMELGKLNARLISSDRVLDTLPLARKKFVGSPASLSALCKRFDISLENRELHGALTDAGLLAKVYVELTGGLQTFLFDNECKQDHNSAFIQHKVRNLTCREHSPSNEEINEHRKLLGKIDNPLWKERIE
2P1J Chain:A ((359-514))
-------VVLDFETTGLDPQVDE-IIEIGAV----KIQGGQIVDEYHTLIKPSREISRKSSEITGITQEMLENKRSIEEVLPEFLGFLEDSIIVAHNANFDYRFLRLWIKKVMG-LDWERPYIDTLALAKSLLKLRSYSLDSVVEK--LGLGPFRHHRALDDARVTAQVFL---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2P1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88198 for 986 contacts (-89.5/contact) +
2D Compatibility (PS) -15852 + (NN) -3451 + (LL) 5040
1D Compatibility (HY) -16000 + (ID) 2950
Total energy: -121411.0 ( -123.13 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_2P1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P1J-query.scw
PDB file :
Tito_Scwrl_2P1J.pdb
: